impute

Ryan Daniels (jryan-daniels) Publisher

Install latest/edge of impute

Ubuntu 16.04 or later?

Make sure snap support is enabled in your Desktop store.

Install using the command line

sudo snap install rjd-impute --edge

Don't have snapd? Get set up for snaps.

impute is only available on the unstable edge channel. It could break and change often.

Channel Version Published

Genotype imputation method

"IMPUTE 5 is a genotype imputation method that can scale to reference panels with millions of samples. It achieves fast, accurate, and memory-efficient imputation by selecting haplotypes using the Positional Burrows Wheeler Transform (PBWT)."

  • The description above refers to the software: https://jmarchini.org/software/
  • I have packaged the software as a snap for personal use but I have made the snap available for free.
  • I do not maintain the software itself. I only maintain the snap packaging. Please report software bugs to the maintainers.
  • Report snap-specific bugs to me.
  • I DO use this snap. It HAS PASSED ALL THE PROVIDED TESTS on my system. I do not track the latest version.
  • Packaging 'style' : binary for linux machines.
  • License refers to the original software, not the snapcraft 'code'.
  • Run the following to rename the snap ```sudo snap alias rjd-impute.impute5 impute5``` ```sudo snap alias rjd-impute.imp5Chunker imp5Chunker``` ```sudo snap alias rjd-impute.xcftools xcftools```

Details for impute

License
  • unset
Last updated
  • 3 May 2024 - latest/edge

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Install impute on your Linux distribution

Choose your Linux distribution to get detailed installation instructions. If yours is not shown, get more details on the installing snapd documentation.

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